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Microservices Observability: Production-Ready Implementation Guide

Executive Summary

Comprehensive guide for implementing Prometheus, Grafana, Jaeger, and OpenTelemetry for microservices monitoring. Covers Docker and Kubernetes deployments with real-world failure scenarios and cost implications.

Critical Prerequisites

Infrastructure Requirements

  • Docker Desktop: 8GB+ RAM allocated (4GB minimum causes performance issues)
  • Kubernetes: 16GB total RAM across cluster (don't cheap out - seriously)
  • Docker Compose: Modern version (not Python legacy version)
  • Helm: Required for Kubernetes deployments
  • kubectl: Must be properly configured (test with kubectl get nodes)

Knowledge Prerequisites

  • Basic Docker understanding (docker ps command familiarity)
  • YAML syntax competency (tabs vs spaces will destroy you)
  • Patience for random failures and debugging sessions

Technology Stack Components

OpenTelemetry Collector

Function: Routes telemetry data without configuring exporters per service
Reality Check:

  • Works until custom processing needed
  • Common error: failed to build pipelines: service "pipelines" has no listeners
  • YAML documentation requires 4+ hours to understand
  • Contrib distributions have processors that actually work

Prometheus

Function: Metrics storage and querying
Performance Issues:

  • Memory usage improvements in latest versions (but not dramatic)
  • High cardinality labels will murder performance
  • UI breaks at 1000+ spans making debugging impossible
  • Default settings fail in production

Jaeger

Function: Distributed tracing visualization
Implementation Reality:

  • User auth taking 2 seconds because of database calls in loops
  • Newer versions work better with OpenTelemetry
  • Still requires 1 hour of configuration tweaking
  • Sampling strategies prevent trace data drowning

Grafana

Function: Dashboard creation and visualization
User Experience:

  • Looks good in demos, confusing in production
  • Query builder induces frustration
  • AI features in v11 are basically useless
  • Community dashboards save significant time

Resource Requirements and Costs

Time Investment

Task Expected Time Reality Check
Docker setup 2-3 hours 8 hours if Docker misbehaves
Kubernetes production 2-3 days minimum 1 week with CrashLoopBackOff issues
Useful dashboards 1 week tweaking Includes cursing at Grafana query builder

Infrastructure Costs

Environment Monthly Cost Notes
Development $50-100 Depends on retention settings
Production $500+ Bills exploded to $1000+ with year retention
Kubernetes Variable AWS bills increased $400+ first month

Hidden Cost: DevOps engineer who understands the stack (when Prometheus OOMs at 2am)

Docker Implementation

Working Docker Compose Configuration

version: '3.8'

services:
  otel-collector:
    image: otel/opentelemetry-collector-contrib:latest
    command: ["--config=/etc/otel-collector-config.yaml"]
    volumes:
      - ./otel-collector-config.yaml:/etc/otel-collector-config.yaml
    ports:
      - "4317:4317"   # OTLP gRPC receiver
      - "4318:4318"   # OTLP HTTP receiver
      - "8889:8889"   # Prometheus metrics endpoint
    depends_on:
      - jaeger-all-in-one
    networks:
      - observability

  prometheus:
    image: prom/prometheus:latest
    command:
      - '--config.file=/etc/prometheus/prometheus.yml'
      - '--storage.tsdb.path=/prometheus'
      - '--web.console.libraries=/etc/prometheus/console_libraries'
      - '--web.console.templates=/etc/prometheus/consoles'
      - '--web.enable-lifecycle'
    ports:
      - "9090:9090"
    volumes:
      - ./prometheus.yml:/etc/prometheus/prometheus.yml
      - prometheus-data:/prometheus
    networks:
      - observability

  jaeger-all-in-one:
    image: jaegertracing/all-in-one:latest
    ports:
      - "16686:16686"  # Jaeger UI
      - "14250:14250"  # gRPC endpoint
    environment:
      - COLLECTOR_OTLP_ENABLED=true
    networks:
      - observability

  grafana:
    image: grafana/grafana:10.2.2
    ports:
      - "3000:3000"
    volumes:
      - grafana-data:/var/lib/grafana
      - ./grafana/provisioning:/etc/grafana/provisioning
    environment:
      - GF_SECURITY_ADMIN_PASSWORD=admin
      - GF_USERS_ALLOW_SIGN_UP=false
    networks:
      - observability

volumes:
  prometheus-data:
  grafana-data:

networks:
  observability:
    driver: bridge

Critical Setup Steps

  1. Create directories: mkdir -p grafana/provisioning/{dashboards,datasources}
  2. Start services: docker-compose up -d
  3. Verify deployment: docker-compose ps
  4. Access endpoints:
    • Grafana: localhost:3000 (admin/admin, 30-second boot time)
    • Prometheus: localhost:9090 (immediate)
    • Jaeger: localhost:16686 (30-second boot time)

Common Deployment Failures

  • Port 3000 taken: Kill zombie React dev server with lsof -ti:3000 | xargs kill -9
  • Grafana won't start: Missing grafana/provisioning directories
  • OTel Collector crashes: Wrong config file path or YAML syntax errors
  • "Exited (1)" status: YAML tabs vs spaces nightmare

Kubernetes Implementation

Resource Planning (Production)

Component RAM Requirement CPU Requirement Storage
Prometheus 4-8GB RAM 500m-1000m 50Gi (fast SSD)
Grafana 512Mi-1Gi 100m-500m 10Gi
Jaeger + Elasticsearch 8GB+ total Variable Variable
OTel Collector 1Gi 250m-500m None

Helm Chart Deployment Sequence

# Add repositories
helm repo add open-telemetry https://github.com/open-telemetry/opentelemetry-helm-charts
helm repo add prometheus-community https://prometheus-community.github.io/helm-charts
helm repo add grafana https://grafana.github.io/helm-charts
helm repo add jaegertracing https://jaegertracing.github.io/helm-charts
helm repo update

# Deploy OpenTelemetry Collector
helm install otel-collector open-telemetry/opentelemetry-collector \
  -f otel-collector-values.yaml \
  -n observability --create-namespace

# Deploy Jaeger
helm install jaeger jaegertracing/jaeger \
  --set provisionDataStore.cassandra=false \
  --set provisionDataStore.elasticsearch=true \
  --set storage.type=elasticsearch \
  -n observability

# Deploy Prometheus Stack
helm install prometheus prometheus-community/kube-prometheus-stack \
  -f prometheus-values.yaml \
  -n observability

Application Instrumentation

Java/Spring Boot Configuration

Dependencies: OpenTelemetry API 1.30.0, SDK, OTLP exporter, Spring Boot starter

Critical Configuration:

management:
  otlp:
    metrics:
      export:
        url: http://otel-collector:4318/v1/metrics
    tracing:
      export:
        url: http://otel-collector:4318/v1/traces

otel:
  exporter:
    otlp:
      endpoint: http://otel-collector:4318
  service:
    name: ${spring.application.name}

Node.js Implementation Issues

Known Problems:

  • Breaks hot reload (nodemon conflicts with HTTP instrumentation)
  • OpenTelemetry hooks interfere with file watching
  • Performance impact on development workflow

Python Flask Limitations

Compatibility Issues:

  • Auto-instrumentation fails with async views (async def route handlers)
  • Manual span management required for asyncio operations
  • FlaskInstrumentor doesn't handle async properly

Production Configuration Requirements

Environment Variables:

OTEL_EXPORTER_OTLP_ENDPOINT: "http://otel-collector:4318"
OTEL_SERVICE_NAME: "service-name"
OTEL_SERVICE_VERSION: "1.0.0"
OTEL_TRACES_SAMPLER: "parentbased_traceidratio"
OTEL_TRACES_SAMPLER_ARG: "0.01"  # 1% sampling for production

Critical Failure Scenarios

Prometheus Context Deadline Exceeded

Root Cause: Expensive PromQL queries or high-cardinality metrics
Impact: Dashboard timeouts, monitoring blindness
Solutions:

  • Increase --query.timeout from 2 to 5 minutes
  • Create recording rules for expensive calculations
  • Avoid rate() on 10k+ series metrics
  • Emergency restart sometimes helps temporarily

Memory Exhaustion (Prometheus)

Symptoms: 8GB+ RAM consumption, OOM kills
Root Cause: High cardinality labels (user IDs, timestamps, session tokens in labels)
Production Impact: Cluster crashes, monitoring downtime
Emergency Fix: --storage.tsdb.max-bytes=4GB to cap memory
Permanent Solution: Hunt and eliminate high-cardinality metrics

Trace Collection Failures

Common Causes:

  • Wrong endpoints (4317 for gRPC, 4318 for HTTP)
  • Sampling too aggressive (use OTEL_TRACES_SAMPLER=always_on for testing)
  • Collector can't reach Jaeger (service name/port issues)
  • Apps not sending traces (instrumentation disabled)

Docker Networking Issues

Symptoms: "Connection refused" errors between services
Root Cause: Using localhost instead of service names
Fix: Use service-name:port not localhost:port
Debug: docker exec -it prometheus curl http://app:8080/metrics

Performance Impact Analysis

Auto-Instrumentation Overhead

Platform Startup Impact Request Latency Development Impact
Java Spring Boot +200ms startup +50-100ms per request Acceptable
Node.js Minimal +50-100ms per request Breaks hot reload
Python Flask Minimal +50-100ms per request Async view issues

Data Volume Reality

Production Experience:

  • 50TB+ trace data generated first month without sampling
  • Bills jumped to $3K+ before implementing 1% sampling
  • High-cardinality metrics caused 50,000 spans per request

Security Configuration

Production Security Checklist

  • RBAC: Enable in Kubernetes (default in managed services)
  • NetworkPolicies: Prevent lateral movement between services
  • TLS: Required everywhere (painful but necessary)
  • Authentication: Change default Grafana admin/admin credentials
  • Resource Limits: Prevent resource exhaustion attacks

Cost Optimization Strategies

Sampling Configuration

# Production sampling rates
OTEL_TRACES_SAMPLER: "parentbased_traceidratio"
OTEL_TRACES_SAMPLER_ARG: "0.01"  # 1% for busy applications
# Development: 100% sampling acceptable
# Production: 1% prevents bankruptcy

Retention Settings

prometheus:
  prometheusSpec:
    retention: 30d  # Not 1 year unless you enjoy massive bills
    resources:
      limits:
        memory: 4Gi  # Set limits or face OOM kills

Deployment Comparison Matrix

Aspect Docker Compose Kubernetes Managed Services
Complexity Easy (if Docker works) YAML hell Easy until customization
Scalability Single machine limit Infinite (expensive) Auto-scales (3x cost)
Maintenance 2am security updates Automated (if configured) Provider responsibility
Production Ready Development only Yes (with expertise) Yes (with SLA)
High Availability Not possible Requires proper configuration Built-in redundancy
Cost Infrastructure only Infrastructure + DevOps engineer 3x more but externalized problems

Troubleshooting Quick Reference

Emergency Commands

# Check container status
docker-compose ps

# View service logs
docker-compose logs [service-name]

# Test metrics endpoint
docker exec -it prometheus curl http://app:8080/metrics

# Kubernetes pod status
kubectl get pods -n observability

# Resource usage monitoring
docker stats

Performance Debugging

  1. Prometheus slow queries: Test in Prometheus UI before Grafana
  2. Missing traces: Check collector logs for export errors
  3. High memory usage: Identify high-cardinality metrics
  4. Network issues: Verify service names and ports in Docker/K8s

Essential Documentation References

Production Deployment Warnings

Critical Failures to Avoid:

  • Default retention settings will bankrupt you
  • High cardinality labels crash clusters
  • Missing resource limits cause cascading failures
  • Auto-instrumentation without sampling generates TB of data
  • ServiceMonitors require Prometheus Operator (install kube-prometheus-stack)

Success Criteria:

  • Metrics collection without OOM kills
  • Trace visibility under 1% sampling
  • Dashboard response under 5 seconds
  • Monthly costs under budget expectations
  • 2am alerts that actually indicate real problems

Useful Links for Further Investigation

Resources That Don't Suck

LinkDescription
Prometheus DocumentationThe official docs are actually good, unlike most open source projects. Covers PromQL, recording rules, and why your queries are slow. Spent more time here than I care to admit.
Jaeger DocumentationDecent documentation, though the deployment examples are basic. Good for understanding sampling and storage options. The troubleshooting section saved me when traces vanished into the void.
Grafana DocumentationGrafana's docs are decent but their query builder UI is still confusing as hell. The dashboard examples help when you're staring at a blank panel for the 50th time.
OpenTelemetry DocumentationComprehensive but overwhelming. Start with the getting started guides, skip the philosophy sections (unless you enjoy existential crises about observability standards).
Microsoft OpenTelemetry ExampleOne of the few complete examples that doesn't skip the hard parts. Shows .NET integration with working configs.
Kubernetes Observability TutorialHands-on tutorial with actual YAML files you can copy. Better than most "enterprise" documentation.
CNCF OpenTelemetry DemoKitchen-sink demo app with every integration. Good for seeing real examples, bad for understanding simple setups. Took me 3 hours to figure out which parts I actually needed. Skip this unless you like complexity for its own sake.
Prometheus OperatorMakes Prometheus work in Kubernetes without manual YAML hell. Required if you want ServiceMonitors to work.
Grafana Helm ChartsOfficial Helm charts that actually work out of the box. Use these instead of writing your own manifests.
Jaeger Kubernetes TemplatesProduction templates with Elasticsearch setup. Warning: Elasticsearch will eat your RAM budget. AWS bills went up like 400 bucks or more the first month we deployed this thing.
Prometheus Performance TuningEssential reading for when Prometheus starts eating 32GB RAM. Covers cardinality and why your metrics design sucks.
Grafana Cloud Observability GuideModern patterns with Grafana Cloud. Expensive but someone else's problem when it breaks. Half the examples won't work in your environment.
CNCF Slack #observabilityActive community that actually helps. Maintainers hang out here and answer real questions.
Prometheus Community ForumOfficial forum that's slower than Slack but has better searchable history for troubleshooting.

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