Multi-Agent System with MCP Architecture - AI-Optimized Technical Reference
Critical System Overview
Technology Stack: MCP (Model Context Protocol) with JSON-RPC 2.0 communication
Architecture Pattern: Coordinator-worker pattern (single point of failure)
Language: Python 3.8+ (3.9 recommended due to asyncio issues in 3.8)
Communication Protocol: JSON-RPC 2.0 over HTTP
Resource Requirements
Hardware Specifications
- Minimum RAM: 16GB (documentation claims 8GB but fails with 4 agents)
- Network: Fast internet required (500MB+ dependency downloads)
- Storage: Monitor Docker disk usage (containers consume significant space)
Time Investment
- Setup Time: 4-6 hours minimum (tutorials underestimate by 50-75%)
- Debugging Allocation: 70% of development time spent on connection issues
- Learning Curve: Expect weeks of debugging distributed systems failures
Core Dependencies and Installation Issues
Required Packages
pip install fastmcp httpx asyncio aiofiles
pip install openai anthropic pydantic jsonschema
Common Installation Failures
Issue | Solution | Frequency |
---|---|---|
fastmcp fails on Windows |
Use WSL2 or abandon Windows | High |
httpx timeout errors |
Network issues, retry installation | Medium |
Import errors with asyncio |
Upgrade from Python 3.7 | Low |
Architecture Components and Failure Modes
MCP Component Types (Source of Confusion)
- MCP Hosts - Where LLM runs (Claude Desktop, custom app)
- MCP Clients - Translation layer between host and servers
- MCP Servers - Actual agents performing work
Critical Note: Each agent is both client AND server (dual role causes debugging complexity)
Coordinator Agent - Single Point of Failure
Function: Task decomposition, agent assignment, result aggregation
Memory Leaks: Python asyncio loops leak memory in long-running services
Timeout Handling: Default 60 seconds (increase for production)
Common Coordinator Failures
- Agents disappear when containers restart
- Task decomposition fails during LLM bad performance days
- Network timeouts kill entire workflow
- Result aggregation crashes on malformed JSON
Configuration That Works
# Realistic timeout settings
timeout_seconds: int = 60
health_check_interval: int = 60 # seconds
max_concurrent_tasks: int = 10 # start low
Worker Agent Specifications
Research Agent - Web Scraper
Capabilities: Web search, content extraction
Rate Limits: Google free tier = 100 searches/day
Memory Pattern: Minimal memory usage
Failure Threshold: Breaks after ~20 requests without rate limiting
Critical Settings:
- Minimum 1 second between requests
- Cache results for 24 hours
- Use multiple search APIs with fallback
- Implement exponential backoff
Analysis Agent - Data Processor
Memory Limit: Crashes on datasets > 100MB
Safe Row Limit: 10,000 rows maximum
Technology Constraint: Pandas not suitable for production workloads
Memory Growth: Exponential with data size
Breaking Points:
- 50MB+ datasets cause OOM crashes
- Complex nested data structures break DataFrame conversion
- Correlation analysis fails randomly on large datasets
Reporter Agent - Markdown Generator
Function: Data to markdown conversion
Reliability: Highest (simplest component)
Memory Usage: Minimal
Failure Mode: Crashes on complex nested data structures
Error Codes and Debugging
JSON-RPC Error Codes (Memorize These)
Code | Meaning | Common Cause |
---|---|---|
-32601 | Method not found | Tool not registered or agent not loaded |
-32602 | Invalid parameters | Schema validation failure |
-32603 | Internal error | Agent crashed or network issue |
Network Debugging Commands
# Check container connectivity
docker exec -it container ping other_container
# Monitor container resource usage
docker stats
# View container logs
docker logs container_name --follow --tail 100
# Check health endpoints
curl -f http://localhost:8000/health
Production Configuration
Docker Resource Limits
services:
analyzer:
mem_limit: 2g # Prevent memory bombs
restart: unless-stopped
healthcheck:
interval: 30s
timeout: 10s
retries: 3
start_period: 30s
Environment Variables
LOG_LEVEL=INFO
MAX_CONCURRENT_TASKS=10 # Start low, increase carefully
REQUEST_TIMEOUT=30 # 30 seconds sufficient
HEALTH_CHECK_INTERVAL=60 # Check agents every minute
Performance Characteristics
Load Testing Results
- Breaking Point: System fails at 20+ concurrent requests
- Success Rate: <80% at failure threshold
- Response Time: Increases linearly with concurrent load
- Memory Usage: Grows with agent count and data size
Scaling Limitations
- Agent Limit: Don't exceed 10 agents (architecture doesn't scale)
- Data Processing: 10K rows maximum per analysis
- Concurrent Tasks: 10 maximum for stability
Critical Warnings and Hidden Costs
What Official Documentation Doesn't Tell You
- Default settings fail in production
- Memory leaks are inevitable with long-running Python services
- Network issues cause cascade failures
- LLM decomposition fails randomly
- Docker containers develop networking problems over time
Operational Costs
- Human Time: 70% debugging, 30% feature development
- Infrastructure: 16GB RAM minimum, fast network required
- API Costs: Rate limiting forces paid API subscriptions
- Monitoring: Essential for production (Prometheus + Grafana recommended)
Breaking Points and Failure Modes
- Container Restarts: Agents disappear from coordinator registry
- Memory Exhaustion: Analysis agent OOMs on realistic datasets
- Rate Limiting: Research agent blocked after minimal usage
- Network Partitions: Coordinator loses track of healthy agents
- Cascade Failures: One agent failure can kill entire workflow
Migration and Scaling Considerations
When to Abandon This Architecture
- More than 10 agents required
- Processing datasets > 100MB
- High availability requirements
- Consistent low-latency needs
Alternative Technologies
- Message Queues: Redis, RabbitMQ for >10 agents
- Microservices: Proper frameworks for scale
- Databases: PostgreSQL instead of pandas for data processing
- Languages: Go for better concurrent performance
Monitoring and Alerting Requirements
Essential Metrics
- Agent health status (binary: healthy/unhealthy)
- Request success rate (target: >95%)
- Average response time (target: <30 seconds)
- Memory usage per container (alert at 80%)
- Error rate by agent type
Alert Conditions
- Any agent unhealthy > 2 minutes
- Success rate < 80% over 5 minutes
- Memory usage > 80% of container limit
- Response time > 60 seconds
- Error rate > 10% over 10 minutes
Testing Strategy
Local Testing Limitations
- Perfect local performance creates false confidence
- Network latency absent in local environment
- Resource constraints not realistic
- Real API failures not simulated
Integration Testing Requirements
- Mock all external APIs (prevent rate limiting)
- Test with realistic network delays
- Simulate container restarts
- Test concurrent load scenarios
- Validate error handling paths
Implementation Decision Tree
Choose MCP When:
- Building demo or prototype system
- Need tool sharing between agents
- Have <10 agents total
- Processing small datasets (<10K rows)
- Can tolerate single point of failure
Avoid MCP When:
- Require high availability
- Need to scale beyond 10 agents
- Processing large datasets (>100MB)
- Cannot tolerate coordinator failures
- Need consistent low latency
Troubleshooting Quick Reference
Agent Registration Issues
- Check agent is running:
curl http://agent:port/health
- Verify coordinator can reach agent network
- Check Docker networking configuration
- Validate agent tool registration completion
Task Execution Failures
- Check coordinator logs for assignment errors
- Verify agent health status in registry
- Test individual agent endpoints directly
- Check for memory or timeout issues
Performance Degradation
- Monitor memory usage across all containers
- Check for network connectivity issues
- Verify no agents stuck in infinite loops
- Review concurrent task limits
This architecture works for demonstrations and small-scale systems but requires significant operational overhead and has fundamental scaling limitations. Plan migration strategy before reaching operational limits.
Useful Links for Further Investigation
Resources That Actually Matter
Link | Description |
---|---|
Model Context Protocol Specification | The actual spec. Read this when you get cryptic JSON-RPC errors and need to understand what's supposed to happen vs what's actually happening. |
Anthropic's MCP Documentation | Better than most docs, includes real examples that sometimes work. Start here for Claude integration. |
MCP GitHub Repository | Source code and examples. More useful than the docs when you need to see how things actually work. |
FastMCP Python Framework | What I used in this tutorial. Lightweight and works for demos. Not sure about production scale. |
MCP TypeScript SDK | Official JavaScript implementation. More mature than the Python stuff if you're building serious applications. |
Go MCP Implementation | For when Python's async performance isn't cutting it and you need something that actually scales. |
Jaeger Tracing | Essential for debugging multi-agent systems. When agents stop talking to each other, this helps figure out where requests are dying. |
Prometheus + Grafana | Standard monitoring stack. Set up dashboards for agent health, request rates, and response times before things break in production. |
Docker Logs Analysis | `docker logs` is your friend. Learn the flags: `--follow`, `--tail`, `--since`. You'll use them constantly. |
MCP Discussions | Official community forum. People post real problems and solutions here. |
MCP Community Discussions | Community discussions about MCP implementations, including war stories and performance tips. |
Stack Overflow - MCP Tag | When you get stuck with specific technical issues, check here for solutions. |
Multi-Agent Systems: A Modern Approach | Academic textbook. Good for understanding the theory behind why multi-agent systems are hard. |
Distributed Systems Course - MIT | Free course materials. Essential for understanding why distributed systems break and how to make them more reliable. |
Building Microservices - Sam Newman | Practical guide to distributed architectures. Many lessons apply to multi-agent systems. |
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