Git's Got Three Places Your Code Can Live

Git Three Trees Diagram

Git's got three places your code can live, and if you don't know which is which, you're gonna delete your work. This isn't academic bullshit - understanding these three areas is the difference between "oops, let me fix that" and "oh fuck, I just lost two weeks of work."

The Three Areas Where Your Code Lives

Working Directory: Your actual file system - the files you're currently editing. Changes here are untracked until you run git add. When you modify files, they exist in the working directory first. Git status shows these as "Changes not staged for commit". The working directory represents your current project state, and understanding how Git tracks changes is crucial for safe operations.

Staging Area (The Index): The intermediate area where you prepare commits. Files go here when you run git add. Git uses this to build the next commit - you can stage part of a file while leaving other changes unstaged. The index concept allows for granular control over what gets committed, and you can unstage files without losing changes.

Repository (Commit History): The permanent record of commits. Each commit creates a snapshot of the staging area. Despite the name "permanent", Git garbage collection will eventually delete unreachable commits after 90 days. Git's object storage model ensures data integrity, and the commit graph structure enables powerful history traversal operations.

Local vs Pushed Commits: Critical Distinction

Local Commits: Safe to Modify

If your commit only exists on your machine, you can safely rewrite history. Use `git reset --soft`, git reset --mixed, or `git commit --amend` without affecting anyone else. Local history rewriting is considered safe practice for cleaning up commit history before sharing.

Common local commit fixes:

Pushed Commits: Require Coordination

Once you've pushed, other developers might have pulled your changes. Rewriting pushed history breaks their local repositories and requires coordination. This is a fundamental principle in collaborative Git workflows and understanding when rewriting is dangerous prevents team conflicts.

Safe options for pushed commits:

Real Disasters I've Caused (And Witnessed)

API keys committed to public GitHub: The security alerts triggered in 47 seconds. Had to rotate every goddamn credential across 12 services while the entire team watched. Final damage: 6 hours downtime, $500 in AWS charges from exposed resources, and a very uncomfortable conversation with security. The lesson? Never commit .env files, ever.

Force-pushed to main branch: Destroyed the deployment pipeline when CI couldn't find the commit hashes it expected. Eight developers had to drop everything and reset their local repositories. Took 3 hours to coordinate because everyone was working on different features. I'm still not allowed to push to main without a code review.

"Simple" one-line fix that broke everything: The change worked perfectly in development. In production, under real load, it introduced a race condition that took down the entire user authentication system for 2 hours during peak traffic. Turns out "simple" fixes are usually the most dangerous ones.

The Reflog: Git's "Oh Shit" Button

Git Reflog Visualization

Here's the thing that saved my ass more times than I can count: Git secretly keeps track of everything you do for 90 days. Every reset, every commit, every merge, every rebase - it's all there in the reflog. Even when you think you've "deleted" commits with git reset --hard, they're still hiding in the reflog. The reflog mechanism is Git's safety net for recovery operations.

Real recovery story: Last month I ran git reset --hard HEAD~10 by mistake and panicked. Two weeks of work, gone. Or so I thought. git reflog --oneline showed me exactly where I was before I fucked everything up. One git reset --hard HEAD@{1} later and my work was back. Crisis averted in 30 seconds.

But there are gotchas:

The bottom line: these three areas (working directory, staging, repository) plus the reflog safety net mean you can unfuck most Git disasters. The key is understanding where your changes land when you run different commands.

Reset Command Comparison

Command

Where Your Changes End Up

What Happens to History

When You Use This

Danger Level

git reset --soft HEAD~1

Staged (ready to commit)

Commit disappears

"I forgot to add tests"

🟢 Safe

git reset --mixed HEAD~1

Working directory (unstaged)

Commit disappears

"I need to split this up"

🟢 Safe

git reset --hard HEAD~1

Gone forever

Commit disappears

"Discard all changes"

🔴 Destructive

git commit --amend

In the amended commit

Rewrites last commit

"Fix typo in message"

🟡 Safe locally

git revert <commit>

In new commit

History preserved

"Everyone saw this already"

🟢 Very Safe

git reflog + reset

Wherever you reset to

Time travel

"Recover lost commits"

🟢 Recovery

Copy-Paste Commands That Actually Work

Git Reset Types Diagram

Here are the exact commands you can copy-paste when everything's fucked, plus the checks to make sure you didn't make it worse.

Method 1: Keep Changes Staged (git reset --soft)

Use case: You need to add files or modify the commit message, but want to keep all changes ready to commit.

## Check current state
git status && git log --oneline -3

## Undo the commit, keep everything staged
git reset --soft HEAD~1

## Verify changes are staged
git status

Real scenario: You committed "Add user authentication" but like an idiot, you forgot the tests. Now the build is broken and everyone's staring at you.

## Before fix
$ git log --oneline -2
a1b2c3d Add user authentication
e4f5g6h Previous working commit

## Apply fix
$ git reset --soft HEAD~1
$ git add tests/auth.test.js tests/auth-integration.test.js
$ git commit -m "Add user authentication with comprehensive tests"

Version bullshit: Git 2.23+ added `git restore` as some kind of "cleaner alternative" but reset --soft still works exactly the same. CentOS 7 ships with Git 1.8 from the fucking Jurassic period and will randomly give you detached HEAD warnings that mean absolutely nothing. Modern distributions use Git 2.30+ with improved default branch support.

Reality check: If you're still using Git older than 1.7 (from 2010), you deserve whatever happens to you. Check your version with `git --version` and upgrade via your package manager or official downloads.

Method 2: Unstage Everything (git reset --mixed)

Use case: You want to selectively choose which changes to include in the new commit.

## Undo commit and unstage everything (default behavior)
git reset HEAD~1

## Review what's available
git status
git diff

Real scenario: You committed your actual feature plus 47 console.log statements, three debug files, and your shopping list. Now you need to separate the wheat from the chaff.

## Interactive staging is your friend
git add -p  # Walk through each hunk

## Or be surgical about specific files
git add src/auth.js src/routes.js
git add tests/
## Ignore: debug.log, temp-notes.txt, shopping-list.md

Platform fuckery:

Method 3: Nuclear Option (git commit --amend)

Git Commit Amend

The "fix typos without creating commit spam" method

## Add forgotten files
git add missed-file.js

## Amend without changing message
git commit --amend --no-edit

## Or fix the commit message too
git commit --amend -m "Add authentication system (and spell words correctly)"

Personal nightmare: I once pushed "fix lgogin bug" to a public GitHub repo. The shame still haunts me. Amending commits before pushing saves you from looking like you failed elementary school.

The force-push reality: If you already pushed, you need git push --force-with-lease. It's safer than --force because it won't overwrite someone's else's changes, but your teammates will still think you're an idiot.

Method 4: Pushed Commits (Now Everyone Knows You Fucked Up)

When your mistake is public and you can't rewrite history

## Find the problematic commit
git log --oneline

## Create a new commit that undoes it
git revert a1b2c3d

## Git opens an editor with a default message like "Revert 'Add broken auth'"
## Save and exit

## Push the revert
git push origin main

Friday afternoon disaster: I reverted what looked like a simple feature commit. Turns out it included database migrations that 6 other developers had already run locally. Their apps broke immediately and started throwing column does not exist errors. Spent the weekend writing migration rollback scripts and coordinating database fixes across multiple environments. Now I check with the team before reverting anything, especially on Fridays.

Multiple commit revert disaster:

## Revert a range (dangerous but sometimes necessary)
git revert --no-commit HEAD~3..HEAD
git commit -m "Revert entire feature because it broke everything"

I learned this when a "simple UI change" broke authentication across 15 microservices because I'd accidentally reverted shared utility functions.

Method 5: Emergency Reflog Recovery (When You Think All Is Lost)

The "holy shit, I just deleted my entire feature branch" recovery

## See everything you've done recently
git reflog --oneline

## Find the commit you want back (example output):
## a1b2c3d HEAD@{0}: reset: moving to HEAD~1
## e4f5g6h HEAD@{1}: commit: The work you just "lost"
## i9j0k1l HEAD@{2}: commit: Previous commit

## Restore to the state you want
git reset --hard HEAD@{1}

Personal panic attack: Last month I meant to type HEAD~1 but typed HEAD~10 instead. Two weeks of work, gone. I literally felt my stomach drop. git reflog --oneline showed me exactly where I was before the disaster. One git reset --hard HEAD@{1} later and everything was back. Total time lost: 30 seconds of panic.

Reflog gotchas:

  • Only works for 90 days by default (configurable with gc.reflogExpire)
  • Each repository has its own reflog - doesn't transfer when you clone
  • If you run git gc --aggressive --prune=now, you're actually fucked
  • Reflog tracks local operations only - remote actions like git fetch don't affect your reflog
  • Branch deletion doesn't immediately delete reflog entries (they expire normally)

Pro Tips for Not Losing Your Sanity

Git Workflow States

Always check status first:

git status && git log --oneline -5

Create a panic branch before doing anything scary:

git branch oh-shit-backup
## Now if you screw up, you can always: git reset --hard oh-shit-backup

The stash is your friend when you're in the middle of something:

git stash push -m "WIP: half-finished feature"
## Do your reset magic
git stash pop  # Get your work back

Key takeaway: Match the reset type to your goal. Use --soft to keep changes staged, --mixed to selectively re-stage, and --hard only when you want to discard everything. Always check your working directory state with git status before and after reset operations.

When Git Fucks You Over (And How to Fight Back)

Q

"fatal: ambiguous argument 'HEAD~1': unknown revision or path not found"

A

What this bullshit means: You're trying to reset in a repository with no commits. HEAD~1 needs at least one commit to reference, but you've got jack shit.

When Git throws this tantrum: New repositories or right after git init when you haven't committed anything yet.

Fix it:

git add .
git commit -m "Initial commit"
## Now HEAD~1 references will work
Q

"error: failed to push some refs to 'origin'"

A

What happened: You modified a commit that was already pushed and now Git is being a massive pain in the ass about it.

Full error message:

! [rejected]        main -> main (non-fast-forward)
error: failed to push some refs to 'origin'
hint: Updates were rejected because the tip of your current branch is behind
hint: its remote counterpart. Integrate the remote changes (e.g.
hint: 'git pull ...') before pushing again.

Solutions:

## Option 1: Force push with safety check (feature branches only)
git push --force-with-lease origin feature-branch

## Option 2: Revert your local changes if others have pulled
git reflog
git reset --hard HEAD@{1}  # Go back to before amendment

## Option 3: Coordinate team reset (requires communication)
## All team members must reset their local branches
Q

"nothing to commit, working tree clean" after git reset --soft

A

Why this is confusing: You just reset and expected to see staged changes, but Git says there's nothing there.

What probably happened: You reset to the exact same commit you're already on, like git reset --soft HEAD~0 or something equally pointless.

Debug steps:

git log --oneline -5  # Where are you?
git reflog            # What did you just do?
Q

I just ran `git reset --hard HEAD~10` and lost two weeks of work

A

Don't panic yet. I've done this exact same stupid thing. Git reflog is your only hope:

## Find your lost commits
git reflog --oneline

## Look for something like:
## a1b2c3d HEAD@{1}: commit: The feature I just "lost"
## e4f5g6h HEAD@{2}: commit: Previous work

## Restore to before you fucked up
git reset --hard HEAD@{1}

Time limit: You get 90 days before Git garbage collection deletes everything. After that, you're genuinely fucked unless you have backups.

Q

I amended a commit that my teammate already pulled

A

The horror: Your teammate Bob pulled your commit, built on top of it, then you amended it and force-pushed. Now Bob can't push.

What Bob sees:

$ git push
error: failed to push some refs to 'origin'
hint: Updates were rejected because the tip of your current branch is behind

Your options:

  1. Revert your amendment (if you haven't pushed yet):

    git reflog
    git reset --hard HEAD@{1}  # Go back to before amendment
    
  2. Coordinate with Bob (if you already pushed):

    # Bob needs to reset his branch to match yours
    git fetch origin
    git reset --hard origin/branch-name
    # Bob loses his local commits (hope he backed them up)
    
  3. Never do this again - don't amend pushed commits without team coordination

Q

Git says my working directory is clean but I know I have changes

A

Possible causes:

  • Your changes are in a different branch
  • Your changes are stashed
  • Your changes were in files that .gitignore is hiding
  • You're in the wrong directory

Debugging:

git status                    # Double-check status
git branch                    # Are you on the right branch?
git stash list                # Did you stash your changes?
git ls-files --others --ignored --exclude-standard  # Hidden files?
pwd                           # Are you in the right repo?
Q

Windows: "filename too long" errors during reset

A

The bullshit: Windows has a 260-character path limit from 1995 that Git constantly hits. This was especially brutal after Docker Desktop changed licensing in August 2021 and everyone moved to deeply nested WSL2 setups. Your reset fails with some cryptic message about path lengths.

Fix it:

git config --global core.longpaths true

Or just use WSL2 like every other Windows developer who wants to stay sane.

Q

macOS: Case-insensitive filesystem fuckups

A

The scenario: You have files named README.md and readme.md in your commit. macOS treats these as the same file, but Git doesn't.

What happens: Reset operations fail with confusing errors about conflicting files.

Prevention: Never name files with only case differences. Ever.

Q

Linux: Permission denied on shared repositories

A

The error: error: insufficient permission for adding an object to repository

Cause: The repository was created by a different user and you don't have write permissions to the .git directory.

Fix:

sudo chown -R $(whoami):$(whoami) .git/
## Or fix the group permissions properly
Q

"Did someone just force-push to main?"

A

What happened: Some genius (probably you) force-pushed to a shared branch and destroyed everyone else's work.

Recovery plan:

  1. Stop everything - tell everyone to stop pushing
  2. Find the last good commit using GitHub's branch protection logs or Git hosting interface
  3. Reset main to the last good state
  4. Each team member needs to realign their local branches

Prevention: Protect your main branch and require pull requests.

Q

Merge conflicts after someone resets shared history

A

The situation: You're trying to push but Git says you're "behind" even though you just pulled.

What this means: Someone rewrote shared history, and now your local commits are based on commits that no longer exist in the remote.

Nuclear option (when coordination fails):

git fetch origin
git reset --hard origin/main
## You lose all local commits - hope you backed them up

Better option (when you can coordinate):

git fetch origin
git rebase origin/main  # Replay your commits on the new history
Q

Git 2.23+ decided to "improve" things

A

What they did: Git added git restore because apparently reset wasn't confusing enough already.

Old way that still works: git reset HEAD~1 -- file.txt
New way they want you to use: git restore --staged file.txt

Reality: The old commands work fine, but Git will passive-aggressively warn you about "deprecated usage."

Q

Ancient Git versions (CentOS 7, I'm looking at you)

A

The horror:

  • --force-with-lease doesn't exist before Git 1.8.5 (from 2013)
  • git stash push doesn't exist before Git 2.13 (from 2017)
  • Interactive rebase barely works and crashes randomly
  • Error messages are even more useless than usual

Solution: Upgrade your damn Git or use a Docker container with something from this decade.

Key principle: Git's reflog and object storage make most operations recoverable within the 90-day garbage collection window. Use git reflog as your first recovery tool, and verify operations with git status before proceeding.

Additional recovery resources: Oh Shit, Git! provides quick fixes for common scenarios, and Git's official recovery documentation covers advanced techniques.

How Not to Fuck Yourself Over in the First Place

Git Branching Strategy

Git Three Areas Diagram

Look, preventing disasters is better than fixing them. Here are the habits that'll save you from most Git-related panic attacks.

Core Principle: Protect Shared History

The golden rule: Don't rewrite commits that other people have pulled. Use git revert for shared commits, save the reset commands for your own local fuckups.

Why this matters: History rewriting destroys other developers' local repositories. Force-push to a shared branch and you'll break CI/CD pipelines and piss off your entire team.

The rule in practice:

  • Feature branch you're working on alone? Reset all you want
  • Main branch? Never touch it with history rewriting
  • Shared feature branch? Check with your teammates first

Branch Safety Guidelines (Hard-Earned Wisdom)

Feature Branches: Your Personal Playground

Go nuts. Reset, rebase, amend - nobody cares until you merge.

## Safe to do on feature branches:
git reset --soft HEAD~3  # Undo last 3 commits
git rebase -i HEAD~5     # Interactive cleanup
git commit --amend       # Fix typos
git push --force-with-lease origin feature-branch  # Update remote

Practical application: Feature branches often accumulate many small commits during development. Use git rebase -i HEAD~10 to squash and reorganize these into logical commits before merging. This creates clean, reviewable history without affecting shared branches.

Main Branch: Treat It Like Production

Because it basically is production. Protected branches should be mandatory, not optional.

## Only safe operations on main:
git revert abc123f  # Creates new commit that undoes changes
git merge --no-ff feature-branch  # Preserves branch history

Protection settings I actually use:

Pre-Disaster Checklist

Git Branching Model

Before doing anything scary, run this mental checklist:

## Where the fuck am I?
git branch --show-current && git status

## What commits am I about to mess with?
git log --oneline -5

## Create a panic button
git branch oh-shit-backup-$(date +%Y%m%d-%H%M%S)

## Stash any work in progress
git stash push -m \"WIP before I potentially break everything\"

Why this works: I've used backup branches to unfuck myself at least 30 times. Creating branches costs nothing, but panic attacks are expensive.

Advanced Recovery: When Everything Goes to Shit

Git Reflog Recovery

Nuclear Disaster Recovery

The scenario: You accidentally git reset --hard HEAD~10 and lost two weeks of work.

## Find your lost commits (don't panic yet)
git reflog --all --oneline

## Look for your work (example output):
## a1b2c3d HEAD@{5}: commit: Fix user authentication bug
## e4f5g6h HEAD@{6}: commit: Add password validation
## i9j0k1l HEAD@{7}: commit: Refactor auth module

## Restore to before you fucked up
git reset --hard a1b2c3d

## Or cherry-pick specific commits if the history is messy
git cherry-pick e4f5g6h i9j0k1l

Time-based recovery (when you remember approximately when things were working):

## Find commits from specific times
git reflog --since=\"2 hours ago\"
git reflog --until=\"yesterday 5pm\"

## Restore deleted branches
git branch recovered-feature HEAD@{10}
Interactive Rebase: The Swiss Army Knife

When your commit history looks like a toddler's art project:

git rebase -i HEAD~5

In the editor:

  • pick → keep commit as-is
  • reword → change commit message
  • edit → pause to modify commit
  • squash → combine with previous commit
  • drop → delete commit entirely

Personal disaster: This was during the log4j panic of December 2021 when everyone was updating everything. I had 47 commits for a single security patch, including masterpieces like "fix", "fix fix", "actually fix", and "fuck it, this works". Interactive rebase saved my dignity by collapsing them into 4 meaningful commits before the emergency security review.

Team Coordination: Don't Be That Guy

When You Must Rewrite Shared History

Sometimes you have no choice. Here's how not to make enemies:

  1. Announce in advance: "I need to rewrite feature-branch history in 1 hour"
  2. Give exact commands: Don't make people guess how to fix their local state
  3. Pick a time when nobody's actively working: Not during standup or right before deployment
  4. Check that everyone's updated: Before you continue working

Commands for teammates after you rewrite:

## If they have no local commits on the branch:
git fetch origin
git reset --hard origin/feature-branch

## If they have local commits:
git fetch origin
git rebase origin/feature-branch  # May need conflict resolution
Merge vs Rebase Strategy (Choose One, Stick With It)

My team's rule: Rebase feature branches, merge to main.

## Feature branch workflow:
git checkout feature-branch
git rebase main  # Clean up history
git checkout main
git merge --no-ff feature-branch  # Preserve branch context

Why this works: Clean linear history on features, but you can still see where features were integrated. This approach is recommended by Atlassian, used by GitHub, and preferred by many enterprise teams.

Configuration That Prevents Disasters

## Don't accidentally push to main
git config --global push.default simple

## Auto-stash during rebase (saves your ass)
git config --global rebase.autoStash true

## See more context in diffs
git config --global diff.context 10

## Keep reflog longer (default 90 days is too short)
git config --global gc.reflogExpire \"1 year\"

## Enable reflog for all branches, not just HEAD
git config --global core.logAllRefUpdates true

## Show more context in merge conflicts (Git 2.35+)
git config --global merge.conflictStyle zdiff3

## Use better algorithm for renames (Git 2.18+)
git config --global diff.renames copies

Aliases that have saved my ass:

git config --global alias.unfuck 'reset --soft HEAD~1'
git config --global alias.nuke 'reset --hard HEAD~1'  
git config --global alias.panic 'branch panic-backup-$(date +%Y%m%d-%H%M%S)'
git config --global alias.wip 'commit -am \"WIP: work in progress\"'
git config --global alias.uncommit 'reset --mixed HEAD~1'
git config --global alias.fucked 'reflog --oneline'
git config --global alias.scorched-earth '!f() { git fetch origin && git reset --hard origin/main; }; f'

CI/CD Protection

GitHub Actions that prevent disasters:

name: Prevent Force Push to Main
on:
  push:
    branches: [main]

jobs:
  check-force-push:
    runs-on: ubuntu-latest
    steps:
      - name: Fail if force push
        run: |
          if [[ \"${{ github.event.forced }}\" == \"true\" ]]; then
            echo \"❌ Force push to main is not allowed\"
            echo \"Use 'git revert' instead of rewriting history\"
            exit 1
          fi

Branch protection webhook (for when GitHub settings aren't enough):

#!/bin/bash
## git-pre-push-hook.sh
protected_branch='main'
current_branch=$(git symbolic-ref HEAD | sed -e 's,.*/\(.*\),\1,')

if [ $protected_branch = $current_branch ]; then
    echo \"❌ Direct push to main branch is not allowed\"
    echo \"Create a pull request instead\"
    exit 1
fi

Repository health monitoring (inspired by GitHub's practices and GitLab's repo management):

#!/bin/bash
## check-git-health.sh - Run this weekly

echo \"🔍 Checking repository health...\"

## Check for large files that shouldn't be tracked
git rev-list --objects --all | \
  git cat-file --batch-check='%(objecttype) %(objectname) %(objectsize) %(rest)' | \
  awk '/^blob/ {print substr($0,6)}' | \
  sort --numeric-sort --key=2 | \
  tail -10

## Check reflog usage
echo -e \"
📊 Reflog entries per branch:\"
git for-each-ref --format='%(refname:short)' | while read branch; do
  count=$(git reflog show --date=short \"$branch\" 2>/dev/null | wc -l)
  echo \"$branch: $count entries\"
done

## Warn about uncommitted changes
if ! git diff --quiet || ! git diff --cached --quiet; then
  echo -e \"
⚠️  Uncommitted changes detected\"
  git status --porcelain
fi

Configuration for Safety

These Git settings reduce the likelihood of commit mistakes:

## Prevent accidental pushes to main
git config --global push.default simple

## Auto-stash during rebase to preserve work
git config --global rebase.autoStash true

## Extend reflog retention beyond 90 days
git config --global gc.reflogExpire \"1 year\"

## Better merge conflict display (Git 2.35+)
git config --global merge.conflictStyle zdiff3

Useful aliases for common operations:

git config --global alias.undo 'reset --soft HEAD~1'
git config --global alias.unstage 'reset HEAD~1'
git config --global alias.panic 'branch panic-backup'

The Bottom Line: You Can Unfuck Almost Anything

Remember the promise from the beginning? That you'd learn to undo commits without losing two weeks of work? Here's what actually matters:

The Three-Second Rule: Check which of Git's three areas your changes should land in:

  • Staging area (--soft) → Ready to commit again with changes
  • Working directory (--mixed) → Pick and choose what to keep
  • Nowhere (--hard) → Nuclear option when you want everything gone

The Golden Rules That Actually Matter:

  1. Local commits: Reset all you want, nobody gets hurt
  2. Pushed commits: Use git revert or coordinate with your team
  3. When in doubt: Create a backup branch first (git branch oh-shit-backup)
  4. When you're fucked: Check git reflog - your work is probably still there

The Real Recovery Truth: Git's reflog keeps track of everything for 90 days. Even when you think you've "deleted" commits with git reset --hard, they're still hiding there. I've recovered from disasters that looked career-ending just by understanding this safety net.

You're Now Unfuck-Proof: With these commands and the understanding of Git's three areas plus reflog recovery, you can handle any commit disaster. The next time someone on your team accidentally force-pushes to main or loses two weeks of work, you'll be the hero with the recovery commands.

Keep this page bookmarked. You'll need it at 3 AM when everything's broken and you're the only one awake to fix it.

Remember that moment of panic when you just committed something catastrophically wrong? That's now in your past. You have the tools to handle any Git disaster: understanding the three areas where your code lives, knowing which reset command matches your goal, and trusting the reflog safety net to save you when everything looks lost.

The next time someone on your team accidentally nukes a feature branch or commits their grocery list to production, you'll be the one with the calm voice saying "I can fix this" while everyone else is having a panic attack. That's the power of actually understanding Git's undo operations instead of just hoping for the best.

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